Cluster Sampling in R: A Simple Guide

code
rtip
Author

Steven P. Sanderson II, MPH

Published

August 2, 2024

Introduction

Cluster sampling is a useful technique when dealing with large datasets spread across different groups or clusters. It involves dividing the population into clusters, randomly selecting some clusters, and then sampling all or some members from these selected clusters. This method can save time and resources compared to simple random sampling.

In this post, we’ll walk through how to perform cluster sampling in R. We’ll use a sample dataset and break down the code step-by-step. By the end, you’ll have a clear understanding of how to implement cluster sampling in your projects.

Example Scenario

Let’s say we have a dataset of students from different schools, and we want to estimate the average test score. Sampling every student would be too time-consuming, so we’ll use cluster sampling.

Step 1: Create a Sample Dataset

First, let’s create a sample dataset to work with.

# Load necessary libraries
library(dplyr)

# Set seed for reproducibility
set.seed(123)

# Create sample data
schools <- data.frame(
  student_id = 1:1000,
  school_id = rep(1:10, each = 100),
  test_score = rnorm(1000, mean = 75, sd = 10)
)

# Display the first few rows of the dataset
head(schools)
  student_id school_id test_score
1          1         1   69.39524
2          2         1   72.69823
3          3         1   90.58708
4          4         1   75.70508
5          5         1   76.29288
6          6         1   92.15065

Step 2: Divide the Population into Clusters

Our population is already divided into clusters by school_id. Each school represents a cluster.

Step 3: Randomly Select Clusters

Next, we’ll randomly select some clusters. Let’s say we want to select 3 out of the 10 schools.

# Number of clusters to select
num_clusters <- 3

# Randomly select clusters
selected_clusters <- sample(unique(schools$school_id), num_clusters)

# Display selected clusters
selected_clusters
[1]  1 10  2

Step 4: Sample Members from Selected Clusters

Now, we’ll sample students from the selected schools.

# Filter the dataset to include only the selected clusters
sampled_data <- schools %>% filter(school_id %in% selected_clusters)

# Display the first few rows of the sampled data
head(sampled_data)
  student_id school_id test_score
1          1         1   69.39524
2          2         1   72.69823
3          3         1   90.58708
4          4         1   75.70508
5          5         1   76.29288
6          6         1   92.15065

Step 5: Analyze the Sampled Data

Finally, we can analyze the sampled data to estimate the average test score.

# Calculate the mean test score
mean_test_score <- mean(sampled_data$test_score)

# Display the mean test score
mean_test_score
[1] 74.87889

Explanation of Code Blocks

  • Step 1: We create a sample dataset with 1000 students, each belonging to one of 10 schools. Each student has a test score.
  • Step 2: The school_id column naturally divides our dataset into clusters.
  • Step 3: We randomly select 3 out of the 10 schools using the sample function.
  • Step 4: We filter the dataset to include only students from the selected schools.
  • Step 5: We calculate the mean test score of the sampled students to estimate the overall average.

Conclusion

Cluster sampling is a powerful method for efficiently sampling large populations. By dividing the population into clusters and sampling within those clusters, you can obtain reliable estimates with less effort.

Feel free to try this method on your own datasets. Experiment with different numbers of clusters and sample sizes to see how it affects your results.


Happy coding!

If you have any questions or need further clarification, drop a comment below!